Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928664.1_cds_XP_016476198.1_68060
CDS Infomation

[gene=LOC107797791] [db_xref=GeneID:107797791] [protein=transcription factor TGA1-like] [protein_id=XP_016476198.1] [location=complement(join(41769..41921,42015..42242,42907..43178,43575..43632,43743..43820,43909..43968,44103..44180,44266..44430))] [gbkey=CDS]
Sequence

ATGAACATGAGTTCTCCATCAACACAATTTGCCCCCACGACAAGGATGGGCATATTCGAA
CCTTTCCACCATATGAGTATGTGGGAAGACGCATTTAGAGGTGAGATTATGCCCGGAACT
GGTGCGTGTATGGTCGCACAGCCAAATGACAGGGTAGATGACAAGTCTGGGTATACTTCA
AGCGAACAACTTATACCCTCGGGCTCTGAGGATAATCAAGCTGGAAAGAGTGTTTCAGAC
AAGGTACAACGGCGTCTAGCACAGAATCGTGAAGCTGCCCGTAAAAGCCGTATGAGGAAA
AAGGCTTATGTTCAGCAGCTTGAAACAAGCCGTATGAAACTAGCACAACTTGAAATGGAG
CTTGAGAGAGCTCGACAGCAAGGATTGTACGTTTTAGGTTCAAATGGTAACATGGGGTTG
AGTGCAACAATTAATCCAGGAATAGCTGCATTTGAGATAGAATACGGCCTCTGGGTCGAA
AAGCAACAGAAAAAGAACATAGAGTTGAGGAATGTTTTGCAATCCCATGTAAGCGAAATG
GAGCTTCAGTTGCTGGTAGAAAGTGTCTTAAGCCACTACTACAATCTCTTCCGAATCAAA
GCTGATGCGGCCAAAGCTGATGTGTTTTACTTAATGTCTGGGATGTGGAGAACTTCAGTT
GAGCGCTTTTTCCTCTGGATTGGAGGATTCAAACCATCAGAACTCATCAATGTCGTGATG
CCACAACTTGAGCCATTGAGTGATCAACAGATAGTGAAAATCTGTAATCTGCGACACTGT
TGTCAGCAAGCTGAGGATGCTCTTACTCAAGGAATGGATAAACTTCAGCAAACTCTGGCC
CAGAGCATCCTAACGATGACAACAGGAATGGGAAGTTACAGTTCCCAGATGGTTTCTAGT
ATGGAAAAGTTAGAAGCACTGGAGAGTTTTGTTAACCAGGCCGATCACCTTCGACACCAA
ACACTACAACAAATGTCTCATATCTTGACTACACGCCAAACAGCTAGGGGATTACTCGCT
TTTGGGGAGTATCTTCAACGTCTTCGTGCTCTGAGCTCGCTTTGGGCTGCCCGTCCTCGT
GAACCTACCTAA

Peptide Sequence

PEP ID

XP_016476198.1
PEP Infomation

PREDICTED: transcription factor TGA1-like [Nicotiana tabacum]
Sequence

MNMSSPSTQFAPTTRMGIFEPFHHMSMWEDAFRGEIMPGTGACMVAQPNDRVDDKSGYTS
SEQLIPSGSEDNQAGKSVSDKVQRRLAQNREAARKSRMRKKAYVQQLETSRMKLAQLEME
LERARQQGLYVLGSNGNMGLSATINPGIAAFEIEYGLWVEKQQKKNIELRNVLQSHVSEM
ELQLLVESVLSHYYNLFRIKADAAKADVFYLMSGMWRTSVERFFLWIGGFKPSELINVVM
PQLEPLSDQQIVKICNLRHCCQQAEDALTQGMDKLQQTLAQSILTMTTGMGSYSSQMVSS
MEKLEALESFVNQADHLRHQTLQQMSHILTTRQTARGLLAFGEYLQRLRALSSLWAARPR
EPT

Transcript Sequence

Gene sequence data has not been registered.